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STRINGSTRING
TERTU_0104 protein (Teredinibacter turnerae T7901) - STRING interaction network
"TERTU_0104" - annotation not available in Teredinibacter turnerae T7901
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TERTU_0104annotation not available (87 aa)    
Predicted Functional Partners:
TERTU_0105
Identified by match to protein family HMM PF00474; Belongs to the sodium-solute symporter (SSF) (TC 2.A.21) family (576 aa)
 
          0.970
TERTU_0107
CBS domain protein; Identified by match to protein family HMM PF00571; match to protein family HMM PF03445 (628 aa)
 
          0.923
TERTU_0108
Putative exonuclease; Identified by match to protein family HMM PF00929 (235 aa)
 
          0.887
TERTU_0106
annotation not available (195 aa)
 
          0.772
TERTU_0103
Identified by match to protein family HMM PF01188; match to protein family HMM PF02746; Belongs to the mandelate racemase/muconate lactonizing enzyme family (402 aa)
              0.467
TERTU_0101
Sensory box histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00474; match to protein family HMM PF00512; match to protein family HMM PF02518 (1213 aa)
 
          0.417
Your Current Organism:
Teredinibacter turnerae T7901
NCBI taxonomy Id: 377629
Other names: T. turnerae T7901, Teredinibacter turnerae T7901, Teredinibacter turnerae str. T7901, Teredinibacter turnerae strain T7901
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