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STRINGSTRING
TERTU_0107 protein (Teredinibacter turnerae T7901) - STRING interaction network
"TERTU_0107" - CBS domain protein in Teredinibacter turnerae T7901
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Cooccurence
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Experiments
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[Homology]
Score
TERTU_0107CBS domain protein; Identified by match to protein family HMM PF00571; match to protein family HMM PF03445 (628 aa)    
Predicted Functional Partners:
TERTU_0108
Putative exonuclease; Identified by match to protein family HMM PF00929 (235 aa)
 
        0.974
TERTU_0105
Identified by match to protein family HMM PF00474; Belongs to the sodium-solute symporter (SSF) (TC 2.A.21) family (576 aa)
 
        0.927
TERTU_0104
annotation not available (87 aa)
 
          0.923
TERTU_0106
annotation not available (195 aa)
 
          0.816
nifJ
Pyruvate-flavodoxin oxidoreductase; Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin (1195 aa)
   
        0.472
TERTU_0109
annotation not available (298 aa)
              0.469
TERTU_0110
Short chain dehydrogenase family protein; Identified by match to protein family HMM PF00106; Belongs to the short-chain dehydrogenases/reductases (SDR) family (224 aa)
              0.453
TERTU_0101
Sensory box histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00474; match to protein family HMM PF00512; match to protein family HMM PF02518 (1213 aa)
 
          0.407
Your Current Organism:
Teredinibacter turnerae T7901
NCBI taxonomy Id: 377629
Other names: T. turnerae T7901, Teredinibacter turnerae T7901, Teredinibacter turnerae str. T7901, Teredinibacter turnerae strain T7901
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