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TERTU_0110 protein (Teredinibacter turnerae) - STRING interaction network
"TERTU_0110" - Short chain dehydrogenase family protein in Teredinibacter turnerae
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TERTU_0110Short chain dehydrogenase family protein (224 aa)    
Predicted Functional Partners:
TERTU_0109
Ggdef (298 aa)
              0.819
TERTU_0108
Exonuclease (235 aa)
              0.477
TERTU_0107
CBS domain-containing protein (628 aa)
              0.477
TERTU_1505
Outer membrane protein (985 aa)
   
          0.459
TERTU_0747
Hypothetical protein (167 aa)
   
          0.449
TERTU_0106
Hypothetical protein (195 aa)
              0.440
Your Current Organism:
Teredinibacter turnerae
NCBI taxonomy Id: 377629
Other names: A. genera incertae sedis, Alteromonadales genera incertae sedis, T. turnerae, T. turnerae T7901, Teredinibacter, Teredinibacter Distel et al. 2002, Teredinibacter turnerae, Teredinibacter turnerae Distel et al. 2002, Teredinibacter turnerae T7901, Teredinibacter turnerae str. T7901, Teredinibacter turnerae strain T7901
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