STRINGSTRING
TERTU_0115 protein (Teredinibacter turnerae) - STRING interaction network
"TERTU_0115" - Trypsin in Teredinibacter turnerae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TERTU_0115Trypsin (427 aa)    
Predicted Functional Partners:
TERTU_3388
Trypsin domain lipoprotein (672 aa)
   
 
 
0.755
TERTU_0285
Chitinase (608 aa)
   
   
  0.704
TERTU_1556
Leucine rich repeat domain-containing protein (184 aa)
       
    0.663
TERTU_3610
Peptidase families S8 and S53 (787 aa)
   
  0.587
TERTU_1238
Peptidase families S8 and S53 (801 aa)
 
   
  0.586
TERTU_2919
Non-specific serine/threonine protein kinase (575 aa)
   
 
    0.582
TERTU_4549
Extracellular protease/nuclease (491 aa)
 
          0.579
TERTU_4161
Non-specific serine/threonine protein kinase (572 aa)
   
 
    0.578
TERTU_3947
Von Willebrand factor A (689 aa)
     
 
    0.573
TERTU_2434
Hypothetical protein (655 aa)
     
 
    0.573
Your Current Organism:
Teredinibacter turnerae
NCBI taxonomy Id: 377629
Other names: A. genera incertae sedis, Alteromonadales genera incertae sedis, T. turnerae, T. turnerae T7901, Teredinibacter, Teredinibacter Distel et al. 2002, Teredinibacter turnerae, Teredinibacter turnerae Distel et al. 2002, Teredinibacter turnerae T7901, Teredinibacter turnerae str. T7901, Teredinibacter turnerae strain T7901
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