STRINGSTRING
ada_1 protein (Teredinibacter turnerae) - STRING interaction network
"ada_1" - methylated-DNA-(protein)-cysteine S-methyltransferase in Teredinibacter turnerae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ada_1methylated-DNA-(protein)-cysteine S-methyltransferase (353 aa)    
Predicted Functional Partners:
polA
DNA polymerase I (908 aa)
     
 
  0.921
ada_2
Ada protein - regulator of adaptive response and methylated-DNA-[protein]-cysteine S-methyltransferase (362 aa)
 
 
0.904
rpoS
RNA polymerase sigma factor RpoS (337 aa)
 
 
 
  0.813
rpoD
RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth (619 aa)
     
 
  0.788
rpoH
Alternative sigma factor RpoH; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is involved in regulation of expression of heat shock genes (284 aa)
     
 
  0.787
TERTU_3038
Fusion of MutT/nudix family protein and thiamine monophosphate synthase (319 aa)
   
 
  0.639
TERTU_2409
Oxidoreductase, 2OG-Fe(II) oxygenase family (207 aa)
   
   
  0.632
TERTU_1549
Alkylated DNA repair protein (211 aa)
   
   
  0.632
tag
DNA-3-methyladenine glycosylase I (193 aa)
         
  0.535
TERTU_1134
Hypothetical protein (223 aa)
         
  0.529
Your Current Organism:
Teredinibacter turnerae
NCBI taxonomy Id: 377629
Other names: A. genera incertae sedis, Alteromonadales genera incertae sedis, T. turnerae, T. turnerae T7901, Teredinibacter, Teredinibacter Distel et al. 2002, Teredinibacter turnerae, Teredinibacter turnerae Distel et al. 2002, Teredinibacter turnerae T7901, Teredinibacter turnerae str. T7901, Teredinibacter turnerae strain T7901
Server load: low (8%) [HD]