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TERTU_0125 protein (Teredinibacter turnerae) - STRING interaction network
"TERTU_0125" - RND transporter HAE1/HME family, permease in Teredinibacter turnerae
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TERTU_0125RND transporter HAE1/HME family, permease (1013 aa)    
Predicted Functional Partners:
TERTU_0126
RND efflux membrane fusion protein (354 aa)
 
   
  0.983
TERTU_4063
Efflux transporter RND family, MFP subunit (389 aa)
 
  0.845
TERTU_3927
Type I secretion outer membrane protein TolC (458 aa)
 
  0.836
TERTU_4050
Efflux transporter RND family, MFP subunit (398 aa)
   
  0.820
TERTU_2145
OqxA (389 aa)
 
  0.803
TERTU_0127
TetR family transcriptional regulator (204 aa)
         
  0.793
TERTU_3619
Outermembrane efflux protein (464 aa)
   
  0.788
yajC
Preprotein translocase, YajC subunit (111 aa)
       
      0.714
TERTU_0778
Efflux transporter RND family, MFP subunit (353 aa)
 
   
  0.682
TERTU_4413
Efflux transporter RND family, MFP subunit (413 aa)
 
   
  0.635
Your Current Organism:
Teredinibacter turnerae
NCBI taxonomy Id: 377629
Other names: A. genera incertae sedis, Alteromonadales genera incertae sedis, T. turnerae, T. turnerae T7901, Teredinibacter, Teredinibacter Distel et al. 2002, Teredinibacter turnerae, Teredinibacter turnerae Distel et al. 2002, Teredinibacter turnerae T7901, Teredinibacter turnerae str. T7901, Teredinibacter turnerae strain T7901
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