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TERTU_0129 protein (Teredinibacter turnerae) - STRING interaction network
"TERTU_0129" - Carbohydrate binding module family 13 domain-containing protein in Teredinibacter turnerae
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TERTU_0129Carbohydrate binding module family 13 domain-containing protein (275 aa)    
Predicted Functional Partners:
TERTU_0130
Pectate lyase (422 aa)
 
     
  0.907
celA
Glycoside hydrolase families 5 and 6 domain protein (1010 aa)
 
   
  0.880
TERTU_0645
Glycoside hydrolase family 9 domain-containing protein (876 aa)
   
   
    0.870
TERTU_3565
Glycoside hydrolase family 5 domain-containing protein (628 aa)
 
   
  0.866
TERTU_1681
Xylanase (369 aa)
 
     
  0.841
TERTU_1599
Xylanase (955 aa)
 
 
  0.834
TERTU_0428
Glycoside hydrolase family 11 and family 5 domain-containing protein (894 aa)
   
  0.832
TERTU_4344
Glycoside hydrolase family 5 domain-containing protein (579 aa)
 
          0.828
TERTU_3347
Glycoside hydrolase family 74 domain-containing protein (1043 aa)
 
          0.825
TERTU_3356
Polysaccharide lyase, family 11 (903 aa)
 
          0.807
Your Current Organism:
Teredinibacter turnerae
NCBI taxonomy Id: 377629
Other names: A. genera incertae sedis, Alteromonadales genera incertae sedis, T. turnerae, T. turnerae T7901, Teredinibacter, Teredinibacter Distel et al. 2002, Teredinibacter turnerae, Teredinibacter turnerae Distel et al. 2002, Teredinibacter turnerae T7901, Teredinibacter turnerae str. T7901, Teredinibacter turnerae strain T7901
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