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TERTU_0142 protein (Teredinibacter turnerae) - STRING interaction network
"TERTU_0142" - Hypothetical protein in Teredinibacter turnerae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TERTU_0142Hypothetical protein (628 aa)    
Predicted Functional Partners:
TERTU_0141
Hypothetical protein (198 aa)
              0.738
TERTU_0747
Hypothetical protein (167 aa)
   
          0.737
TERTU_0748
Hypothetical protein (584 aa)
   
          0.715
TERTU_4092
TonB-dependent receptor (1105 aa)
   
          0.711
TERTU_2016
TonB-dependent receptor (789 aa)
   
          0.672
TERTU_2015
Adenosine deaminase (469 aa)
   
          0.639
TERTU_1253
Membrane protein (342 aa)
   
          0.633
TERTU_4097
Transporter SSS family (634 aa)
   
          0.597
TERTU_1857
PT repeat/fibro-slime domain-containing protein (1213 aa)
   
          0.586
TERTU_0044
Hypothetical protein (425 aa)
   
          0.561
Your Current Organism:
Teredinibacter turnerae
NCBI taxonomy Id: 377629
Other names: A. genera incertae sedis, Alteromonadales genera incertae sedis, T. turnerae, T. turnerae T7901, Teredinibacter, Teredinibacter Distel et al. 2002, Teredinibacter turnerae, Teredinibacter turnerae Distel et al. 2002, Teredinibacter turnerae T7901, Teredinibacter turnerae str. T7901, Teredinibacter turnerae strain T7901
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