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STRINGSTRING
TERTU_0142 protein (Teredinibacter turnerae T7901) - STRING interaction network
"TERTU_0142" - annotation not available in Teredinibacter turnerae T7901
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TERTU_0142annotation not available (628 aa)    
Predicted Functional Partners:
TERTU_0141
annotation not available (198 aa)
              0.734
TERTU_0044
annotation not available (425 aa)
   
          0.703
TERTU_0852
annotation not available (432 aa)
   
          0.651
TERTU_3729
Peptidase, S8/S53 family; Identified by match to protein family HMM PF00082; Belongs to the peptidase S8 family (2564 aa)
   
          0.650
TERTU_2231
Uncharacterized protein; Identified by glimmer; putative (1384 aa)
 
          0.649
TERTU_3354
CARDB domain protein; Phosphodiesterase superamily; identified by match to protein family HMM PF07705 (796 aa)
 
          0.649
TERTU_0031
annotation not available (415 aa)
   
          0.644
TERTU_0353
Glycoside hydrolase family 12 domain protein; Identified by similarity to GB-CAA93274.1; Belongs to the glycosyl hydrolase 12 (cellulase H) family (278 aa)
   
          0.634
TERTU_4311
Uncharacterized protein; Identified by glimmer; putative (682 aa)
   
          0.626
TERTU_0017
Identified by match to protein family HMM PF00092; match to protein family HMM PF00413 (877 aa)
   
          0.624
Your Current Organism:
Teredinibacter turnerae T7901
NCBI taxonomy Id: 377629
Other names: T. turnerae T7901, Teredinibacter turnerae T7901, Teredinibacter turnerae str. T7901, Teredinibacter turnerae strain T7901
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