STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACR11155.1Identified by match to protein family HMM PF00561. (289 aa)    
Predicted Functional Partners:
ACR11630.1
Hydratase/decarboxylase; Identified by similarity to SP:P77608; match to protein family HMM PF01689.
 
 
 0.992
ACR11988.1
Aromatic ring-opening dioxygenase, catalytic LigB subunit family protein; Identified by match to protein family HMM PF02900.
 
  
 0.986
ACR11501.1
Hypothetical protein; Identified by glimmer; putative.
    
  0.976
ACR14176.1
Carbazole dioxygenase-like protein; Identified by match to protein family HMM PF00355.
 
 
 
 0.930
ACR12194.1
acyl-CoA dehydrogenase; Identified by match to protein family HMM PF00441; match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028.
  
 0.855
dmpG
4-hydroxy-2-oxovalerate aldolase; Catalyzes the retro-aldol cleavage of 4-hydroxy-2- oxopentanoate to pyruvate and acetaldehyde. Is involved in the meta- cleavage pathway for the degradation of aromatic compounds. Belongs to the 4-hydroxy-2-oxovalerate aldolase family.
 
  
 0.724
ACR14193.1
Acetaldehyde dehydrogenase; Catalyzes the conversion of acetaldehyde to acetyl-CoA, using NAD(+) and coenzyme A. Is the final enzyme in the meta-cleavage pathway for the degradation of aromatic compounds.
 
  
 0.717
ACR11986.1
Identified by match to protein family HMM PF00561; match to protein family HMM PF07819.
  
   
 0.695
ACR14327.1
Putative acetaldehyde dehydrogenase; Catalyzes the conversion of acetaldehyde to acetyl-CoA, using NAD(+) and coenzyme A. Is the final enzyme in the meta-cleavage pathway for the degradation of aromatic compounds.
 
  
 0.691
ACR12418.1
Modular polyketide synthase, type I PKS; Identified by match to protein family HMM PF00106; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF01370; match to protein family HMM PF02801; match to protein family HMM PF08659.
  
 
 0.554
Your Current Organism:
Teredinibacter turnerae T7901
NCBI taxonomy Id: 377629
Other names: T. turnerae T7901, Teredinibacter turnerae str. T7901, Teredinibacter turnerae strain T7901
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