STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACR12789.1Identified by match to protein family HMM PF00892. (294 aa)    
Predicted Functional Partners:
ACR13358.1
Phospholipase, patatin family; Identified by match to protein family HMM PF01734.
       0.631
ACR12918.1
Putative lipoprotein.
  
     0.582
ACR14112.1
Conserved hypothetical protein.
  
     0.576
ACR14300.1
Putative lipoprotein.
  
     0.563
ACR14137.1
Putative partition protein ParA.
 
     0.549
ACR11228.1
Putative histidine kinase.
       0.535
ACR14588.1
Hypothetical protein; Identified by glimmer; putative.
 
     0.480
ACR13484.1
Conserved hypothetical protein.
  
     0.473
ACR12273.1
Putative lipoprotein.
  
     0.471
ACR13634.1
Identified by match to protein family HMM PF01957.
       0.465
Your Current Organism:
Teredinibacter turnerae T7901
NCBI taxonomy Id: 377629
Other names: T. turnerae T7901, Teredinibacter turnerae str. T7901, Teredinibacter turnerae strain T7901
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