Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ACR10693.1 | ACR13995.1 | TERTU_1969 | TERTU_1971 | DNA translocase ftsK; Identified by match to protein family HMM PF01580; match to protein family HMM PF09397. | ATPase, AAA family; Identified by match to protein family HMM PF00004; match to protein family HMM PF07728. | 0.876 |
| ACR10693.1 | aat | TERTU_1969 | TERTU_1967 | DNA translocase ftsK; Identified by match to protein family HMM PF01580; match to protein family HMM PF09397. | Leucyltransferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine. | 0.510 |
| ACR10693.1 | bpt | TERTU_1969 | TERTU_1966 | DNA translocase ftsK; Identified by match to protein family HMM PF01580; match to protein family HMM PF09397. | Putative arginyl-tRNA--protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate. Belongs to the R-transferase family. Bpt subfamily. | 0.504 |
| ACR10693.1 | crcB | TERTU_1969 | TERTU_1972 | DNA translocase ftsK; Identified by match to protein family HMM PF01580; match to protein family HMM PF09397. | CrcB protein; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family. | 0.830 |
| ACR10693.1 | cysG | TERTU_1969 | TERTU_1974 | DNA translocase ftsK; Identified by match to protein family HMM PF01580; match to protein family HMM PF09397. | Siroheme synthase; Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD-dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme. Belongs to the precorrin methyltransferase family. In the N-terminal section; belongs to the precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase family. | 0.718 |
| ACR10693.1 | lolA | TERTU_1969 | TERTU_1970 | DNA translocase ftsK; Identified by match to protein family HMM PF01580; match to protein family HMM PF09397. | Outer membrane lipoprotein carrier protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.866 |
| ACR10693.1 | trxB | TERTU_1969 | TERTU_1968 | DNA translocase ftsK; Identified by match to protein family HMM PF01580; match to protein family HMM PF09397. | Thioredoxin-disulfide reductase; Identified by match to protein family HMM PF00070; match to protein family HMM PF07992; match to protein family HMM TIGR01292. | 0.633 |
| ACR13995.1 | ACR10693.1 | TERTU_1971 | TERTU_1969 | ATPase, AAA family; Identified by match to protein family HMM PF00004; match to protein family HMM PF07728. | DNA translocase ftsK; Identified by match to protein family HMM PF01580; match to protein family HMM PF09397. | 0.876 |
| ACR13995.1 | aat | TERTU_1971 | TERTU_1967 | ATPase, AAA family; Identified by match to protein family HMM PF00004; match to protein family HMM PF07728. | Leucyltransferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine. | 0.430 |
| ACR13995.1 | bpt | TERTU_1971 | TERTU_1966 | ATPase, AAA family; Identified by match to protein family HMM PF00004; match to protein family HMM PF07728. | Putative arginyl-tRNA--protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate. Belongs to the R-transferase family. Bpt subfamily. | 0.430 |
| ACR13995.1 | crcB | TERTU_1971 | TERTU_1972 | ATPase, AAA family; Identified by match to protein family HMM PF00004; match to protein family HMM PF07728. | CrcB protein; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family. | 0.830 |
| ACR13995.1 | cysG | TERTU_1971 | TERTU_1974 | ATPase, AAA family; Identified by match to protein family HMM PF00004; match to protein family HMM PF07728. | Siroheme synthase; Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD-dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme. Belongs to the precorrin methyltransferase family. In the N-terminal section; belongs to the precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase family. | 0.741 |
| ACR13995.1 | lolA | TERTU_1971 | TERTU_1970 | ATPase, AAA family; Identified by match to protein family HMM PF00004; match to protein family HMM PF07728. | Outer membrane lipoprotein carrier protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.852 |
| ACR13995.1 | trxB | TERTU_1971 | TERTU_1968 | ATPase, AAA family; Identified by match to protein family HMM PF00004; match to protein family HMM PF07728. | Thioredoxin-disulfide reductase; Identified by match to protein family HMM PF00070; match to protein family HMM PF07992; match to protein family HMM TIGR01292. | 0.552 |
| aat | ACR10693.1 | TERTU_1967 | TERTU_1969 | Leucyltransferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine. | DNA translocase ftsK; Identified by match to protein family HMM PF01580; match to protein family HMM PF09397. | 0.510 |
| aat | ACR13995.1 | TERTU_1967 | TERTU_1971 | Leucyltransferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine. | ATPase, AAA family; Identified by match to protein family HMM PF00004; match to protein family HMM PF07728. | 0.430 |
| aat | bpt | TERTU_1967 | TERTU_1966 | Leucyltransferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine. | Putative arginyl-tRNA--protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate. Belongs to the R-transferase family. Bpt subfamily. | 0.878 |
| aat | clpA | TERTU_1967 | TERTU_1963 | Leucyltransferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine. | ATP-dependent Clp protease ATP-binding subunit ClpA; Identified by match to protein family HMM PF00004; match to protein family HMM PF02861; match to protein family HMM PF07724; match to protein family HMM PF07728; match to protein family HMM TIGR02639; Belongs to the ClpA/ClpB family. | 0.442 |
| aat | clpS | TERTU_1967 | TERTU_1962 | Leucyltransferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine. | Sua5/YciO/YrdC/YwlC; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family. | 0.810 |
| aat | crcB | TERTU_1967 | TERTU_1972 | Leucyltransferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine. | CrcB protein; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family. | 0.428 |
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