STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACR12366.1Identified by match to protein family HMM PF01401. (592 aa)    
Predicted Functional Partners:
ACR13087.1
Amino acid/peptide transporter; Identified by match to protein family HMM PF00854; match to protein family HMM TIGR00924.
 
   
 0.635
ACR14789.1
Peptidase, M13 family; Identified by match to protein family HMM PF01431; match to protein family HMM PF05649.
  
   
 0.605
ACR14657.1
TonB-dependent receptor; Identified by match to protein family HMM PF00593; match to protein family HMM PF07715.
  
     0.599
ACR11053.1
Conserved hypothetical protein; Catalyzes the removal of dipeptides from the N-terminus of oligopeptides.
  
     0.531
ACR14784.1
Putative methyltransferase; Probable secreted protein, N-terminal signal sequence.
  
     0.496
ACR11979.1
Identified by match to protein family HMM PF00561.
  
   
 0.495
ACR14598.1
Metalloprotease III; Identified by similarity to GB:BAC22656.1; match to protein family HMM PF00801; match to protein family HMM PF01447; match to protein family HMM PF02868.
  
  
 0.456
ACR11926.1
HAD hydrolase domain protein; Identified by match to protein family HMM PF00702; match to protein family HMM TIGR01509; match to protein family HMM TIGR01549.
       0.442
ACR11178.1
TonB-dependent receptor; Identified by match to protein family HMM PF00593; match to protein family HMM PF07715.
  
     0.435
metX
Homoserine O-acetyltransferase; Transfers a succinyl group from succinyl-CoA to L-homoserine, forming succinyl-L-homoserine.
   
    0.431
Your Current Organism:
Teredinibacter turnerae T7901
NCBI taxonomy Id: 377629
Other names: T. turnerae T7901, Teredinibacter turnerae str. T7901, Teredinibacter turnerae strain T7901
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.