STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACR12247.1Identified by match to protein family HMM PF00150; match to protein family HMM PF00553; match to protein family HMM PF02013. (650 aa)    
Predicted Functional Partners:
cbpA
Cellobiose phosphorylase; Identified by similarity to GB:AAB95491.2; match to protein family HMM PF06165; match to protein family HMM PF06204; match to protein family HMM PF06205.
  
  
 0.920
ACR14000.1
Cellobiohydrolase; Identified by match to protein family HMM PF01341; Belongs to the glycosyl hydrolase family 6.
  
 
  0.769
ACR10861.1
Carbohydrate esterase family 2 domain protein.
 
     0.759
ACR13782.1
Identified by match to protein family HMM PF00150.
 
     0.738
ACR10686.1
Identified by match to protein family HMM PF00657; match to protein family HMM PF00933; match to protein family HMM PF01915.
 
  
 0.731
celA
Glycoside hydrolase families 5 and 6 domain protein; Identified by match to protein family HMM PF00150; match to protein family HMM PF01341; match to protein family HMM PF02013; match to protein family HMM PF02839.
  
 
 
0.729
ACR13299.1
Identified by match to protein family HMM PF00933; match to protein family HMM PF01915.
 
  
 0.710
ACR12723.1
Cellobiohydrolase; Identified by match to protein family HMM PF01341; match to protein family HMM PF02013; match to protein family HMM PF02839; Belongs to the glycosyl hydrolase family 6.
  
 
 
0.700
ACR14581.1
Conserved hypothetical protein.
  
 
   0.685
ACR11565.1
Xylanase; Identified by match to protein family HMM PF00331.
  
     0.669
Your Current Organism:
Teredinibacter turnerae T7901
NCBI taxonomy Id: 377629
Other names: T. turnerae T7901, Teredinibacter turnerae str. T7901, Teredinibacter turnerae strain T7901
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.