STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRH_14210Hypothetical protein. (122 aa)    
Predicted Functional Partners:
KRH_14200
Hypothetical membrane protein.
 
     0.852
KRH_14220
Hypothetical protein.
       0.816
KRH_10060
Hypothetical protein.
  
   
 0.649
KRH_23460
Hypothetical protein.
 
     0.630
KRH_06900
Hypothetical membrane protein.
  
     0.605
KRH_14290
Hypothetical protein.
  
     0.599
KRH_01630
Hypothetical protein.
  
     0.597
KRH_13980
Putative acetyltransferase.
 
    0.593
KRH_06800
Hypothetical protein.
  
     0.586
KRH_19230
Hypothetical membrane protein.
  
     0.581
Your Current Organism:
Kocuria rhizophila
NCBI taxonomy Id: 378753
Other names: K. rhizophila DC2201, Kocuria rhizophila ATCC 9341, Kocuria rhizophila DC2201, Kocuria rhizophila DSM 348, Kocuria rhizophila NBRC 103217, Kocuria rhizophila str. DC2201, Kocuria rhizophila strain DC2201, Micrococcus luteus ATCC 9341
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.