STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADO68190.1Alpha-l-arabinofuranosidase b (Abfb) family protein. (731 aa)    
Predicted Functional Partners:
ADO74408.1
Conserved uncharacterized protein.
 
   
 0.749
ADO73889.1
Glycoside hydrolase, family 43.
 
     0.732
ADO74569.1
Glycoside hydrolase, family 43.
 
     0.706
ADO74440.1
Glycoside hydrolase family 2 protein; Belongs to the glycosyl hydrolase 2 family.
  
     0.701
merU
Conserved uncharacterized protein MerU.
 
     0.676
ADO73890.1
Xylosidase/arabinosidase; Belongs to the glycosyl hydrolase 43 family.
 
     0.668
ADO68177.1
Secreted endo-beta-1,6-galactanase.
 
    0.655
ADO68328.1
Glycosyl hydrolase, family 76.
  
     0.655
ADO70015.1
Glycoside hydrolase, family 76.
  
     0.636
ADO69642.1
Esterase.
  
     0.632
Your Current Organism:
Stigmatella aurantiaca
NCBI taxonomy Id: 378806
Other names: S. aurantiaca DW4/3-1, Stigmatella aurantiaca DW4/3-1, Stigmatella aurantiaca str. DW4/3-1, Stigmatella aurantiaca strain DW4/3-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.