Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ADO71302.1 | ADO74336.1 | STAUR_3512 | STAUR_6579 | DNA polymerase IV, X family/PHP domain protein. | Conserved uncharacterized protein. | 0.477 |
ADO71302.1 | ADO74523.1 | STAUR_3512 | STAUR_6766 | DNA polymerase IV, X family/PHP domain protein. | Conserved uncharacterized protein. | 0.477 |
ADO71302.1 | dnaN | STAUR_3512 | STAUR_0589 | DNA polymerase IV, X family/PHP domain protein. | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.636 |
ADO71302.1 | ligD | STAUR_3512 | STAUR_6997 | DNA polymerase IV, X family/PHP domain protein. | ATP dependent DNA ligase. | 0.901 |
ADO71302.1 | pol | STAUR_3512 | STAUR_0389 | DNA polymerase IV, X family/PHP domain protein. | DNA polymerase. | 0.483 |
ADO71302.1 | polA-2 | STAUR_3512 | STAUR_4965 | DNA polymerase IV, X family/PHP domain protein. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.912 |
ADO71302.1 | xth | STAUR_3512 | STAUR_5931 | DNA polymerase IV, X family/PHP domain protein. | Exodeoxyribonuclease III. | 0.895 |
ADO71868.1 | ADO74336.1 | STAUR_4084 | STAUR_6579 | Type I topoisomerase. | Conserved uncharacterized protein. | 0.507 |
ADO71868.1 | ADO74523.1 | STAUR_4084 | STAUR_6766 | Type I topoisomerase. | Conserved uncharacterized protein. | 0.498 |
ADO71868.1 | dnaN | STAUR_4084 | STAUR_0589 | Type I topoisomerase. | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.405 |
ADO71868.1 | ligD | STAUR_4084 | STAUR_6997 | Type I topoisomerase. | ATP dependent DNA ligase. | 0.772 |
ADO71868.1 | pol | STAUR_4084 | STAUR_0389 | Type I topoisomerase. | DNA polymerase. | 0.480 |
ADO71868.1 | polA-2 | STAUR_4084 | STAUR_4965 | Type I topoisomerase. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.405 |
ADO74336.1 | ADO71302.1 | STAUR_6579 | STAUR_3512 | Conserved uncharacterized protein. | DNA polymerase IV, X family/PHP domain protein. | 0.477 |
ADO74336.1 | ADO71868.1 | STAUR_6579 | STAUR_4084 | Conserved uncharacterized protein. | Type I topoisomerase. | 0.507 |
ADO74336.1 | ADO74526.1 | STAUR_6579 | STAUR_6769 | Conserved uncharacterized protein. | Metallophosphoesterase. | 0.788 |
ADO74336.1 | ligD | STAUR_6579 | STAUR_6997 | Conserved uncharacterized protein. | ATP dependent DNA ligase. | 0.797 |
ADO74336.1 | polA-2 | STAUR_6579 | STAUR_4965 | Conserved uncharacterized protein. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.543 |
ADO74523.1 | ADO71302.1 | STAUR_6766 | STAUR_3512 | Conserved uncharacterized protein. | DNA polymerase IV, X family/PHP domain protein. | 0.477 |
ADO74523.1 | ADO71868.1 | STAUR_6766 | STAUR_4084 | Conserved uncharacterized protein. | Type I topoisomerase. | 0.498 |
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