Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
flgC | flgE | GAU_0334 | GAU_0323 | Flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family. | Flagellar hook protein FlgE. | 0.993 |
flgC | flgK | GAU_0334 | GAU_0299 | Flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family. | Flagellar hook-associated protein 1. | 0.981 |
flgC | fliD | GAU_0334 | GAU_0353 | Flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family. | Flagellar hook-associated protein 2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | 0.964 |
flgC | fliG | GAU_0334 | GAU_0330 | Flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family. | Flagellar motor switch protein FliG. | 0.987 |
flgC | fliI | GAU_0334 | GAU_0328 | Flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family. | Flagellum-specific ATP synthase. | 0.982 |
flgC | fliM | GAU_0334 | GAU_0321 | Flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family. | Flagellar motor switch protein FliM. | 0.984 |
flgC | fliN | GAU_0334 | GAU_0320 | Flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family. | Flagellar motor switch protein FliN. | 0.988 |
flgC | fliS | GAU_0334 | GAU_0354 | Flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family. | Flagellar protein FliS. | 0.922 |
flgC | fliW | GAU_0334 | GAU_0338 | Flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family. | Hypothetical protein; Acts as an anti-CsrA protein, binds CsrA and prevents it from repressing translation of its target genes, one of which is flagellin. Binds to flagellin and participates in the assembly of the flagellum. | 0.856 |
flgC | hag | GAU_0334 | GAU_0352 | Flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family. | Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | 0.961 |
flgE | flgC | GAU_0323 | GAU_0334 | Flagellar hook protein FlgE. | Flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family. | 0.993 |
flgE | flgK | GAU_0323 | GAU_0299 | Flagellar hook protein FlgE. | Flagellar hook-associated protein 1. | 0.981 |
flgE | fliD | GAU_0323 | GAU_0353 | Flagellar hook protein FlgE. | Flagellar hook-associated protein 2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | 0.964 |
flgE | fliG | GAU_0323 | GAU_0330 | Flagellar hook protein FlgE. | Flagellar motor switch protein FliG. | 0.992 |
flgE | fliI | GAU_0323 | GAU_0328 | Flagellar hook protein FlgE. | Flagellum-specific ATP synthase. | 0.988 |
flgE | fliM | GAU_0323 | GAU_0321 | Flagellar hook protein FlgE. | Flagellar motor switch protein FliM. | 0.987 |
flgE | fliN | GAU_0323 | GAU_0320 | Flagellar hook protein FlgE. | Flagellar motor switch protein FliN. | 0.987 |
flgE | fliS | GAU_0323 | GAU_0354 | Flagellar hook protein FlgE. | Flagellar protein FliS. | 0.911 |
flgE | fliW | GAU_0323 | GAU_0338 | Flagellar hook protein FlgE. | Hypothetical protein; Acts as an anti-CsrA protein, binds CsrA and prevents it from repressing translation of its target genes, one of which is flagellin. Binds to flagellin and participates in the assembly of the flagellum. | 0.732 |
flgE | hag | GAU_0323 | GAU_0352 | Flagellar hook protein FlgE. | Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | 0.961 |
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