STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nosLPutative nitrous oxidase accessory protein NosL. (167 aa)    
Predicted Functional Partners:
nosD
Putative nitrous oxidase accessory protein NosD.
 
 
 0.997
nosY
Putative nitrous oxide reductase accessory protein NosY.
 
 
 0.991
nosF
Putative nitrous oxide reductase accessory protein NosF.
 
 
 0.976
nosZ
Putative nitrous oxide reductase.
 
  
 0.973
GAU_1384
Hypothetical membrane protein.
 
     0.952
GAU_0249
Peptidase M1 family protein.
  
 
 0.764
GAU_0271
Hypothetical membrane protein.
  
 
 0.764
GAU_1387
Hypothetical membrane protein.
 
     0.724
GAU_0368
Hypothetical protein.
  
     0.609
GAU_1379
Blue-copper protein.
       0.596
Your Current Organism:
Gemmatimonas aurantiaca
NCBI taxonomy Id: 379066
Other names: G. aurantiaca T-27, Gemmatimonas aurantiaca DSM 14586, Gemmatimonas aurantiaca JCM 11422, Gemmatimonas aurantiaca NBRC 100505, Gemmatimonas aurantiaca T-27, Gemmatimonas aurantiaca str. T-27, Gemmatimonas aurantiaca strain T-27
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.