STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAU_3064Hypothetical protein; Belongs to the UPF0403 family. (141 aa)    
Predicted Functional Partners:
GAU_1596
Hypothetical protein.
  
   
 0.798
groES-2
Putative 10 kDa chaperonin.
       0.773
GAU_1532
Putative glycosyltransferase.
  
     0.771
GAU_0908
Putative oxidoreductase.
  
   
 0.762
GAU_3066
Hypothetical protein.
       0.757
GAU_2340
Hypothetical protein.
  
     0.717
GAU_3067
Hypothetical membrane protein.
       0.716
GAU_1135
Hypothetical protein.
  
     0.688
GAU_1343
Hypothetical protein.
  
     0.678
GAU_3805
Hypothetical protein.
  
     0.672
Your Current Organism:
Gemmatimonas aurantiaca
NCBI taxonomy Id: 379066
Other names: G. aurantiaca T-27, Gemmatimonas aurantiaca DSM 14586, Gemmatimonas aurantiaca JCM 11422, Gemmatimonas aurantiaca NBRC 100505, Gemmatimonas aurantiaca T-27, Gemmatimonas aurantiaca str. T-27, Gemmatimonas aurantiaca strain T-27
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.