STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAU_3689Hypothetical protein. (294 aa)    
Predicted Functional Partners:
GAU_1574
Hypothetical protein.
  
     0.700
GAU_1038
Hypothetical membrane protein.
  
     0.696
GAU_1613
Hypothetical membrane protein.
  
     0.687
GAU_1585
Bacterial surface antigen (D15) family protein.
  
     0.684
GAU_1201
Hypothetical protein.
  
     0.682
GAU_1395
Hypothetical membrane protein.
  
     0.676
GAU_0043
Hypothetical membrane protein.
  
     0.670
GAU_1277
Hypothetical membrane protein.
  
     0.664
GAU_1282
Hypothetical protein.
  
     0.643
GAU_0638
Putative response regulator.
  
     0.597
Your Current Organism:
Gemmatimonas aurantiaca
NCBI taxonomy Id: 379066
Other names: G. aurantiaca T-27, Gemmatimonas aurantiaca DSM 14586, Gemmatimonas aurantiaca JCM 11422, Gemmatimonas aurantiaca NBRC 100505, Gemmatimonas aurantiaca T-27, Gemmatimonas aurantiaca str. T-27, Gemmatimonas aurantiaca strain T-27
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.