STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMM30880.1Hypothetical protein; Pfam:pfam01408 Oxidoreductase family, NAD-binding Rossmann fold. (377 aa)    
Predicted Functional Partners:
AMM30879.1
Sugar epimerase; Pfam:pfam01261 Xylose isomerase-like TIM barrel.
 
    0.951
AMM30881.1
Alpha-mannosidase; Pfam:pfam01074 Glycosyl hydrolases family 38 N-terminal domain.
 
    0.934
AMM30878.1
Pfam:pfam02811 PHP domain.
 
     0.844
AMM30874.1
ABC transporter substrate-binding protein; Pfam:pfam01547 Bacterial extracellular solute-binding protein.
 
    0.841
AMM30875.1
ABC transporter permease; Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component.
 
     0.784
AMM30876.1
ABC transporter permease; Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component.
 
     0.767
AMM31824.1
Acetolactate synthase; Pfam:pfam00205 Thiamine pyrophosphate enzyme, central domain; Belongs to the TPP enzyme family.
 
  
 0.712
AMM31831.1
5-deoxyglucuronate isomerase; Pfam:pfam04962 KduI/IolB family.
 
  
 0.699
AMM31840.1
Inositol 2-dehydrogenase; Pfam:pfam01408 Oxidoreductase family, NAD-binding Rossmann fold.
  
     0.644
AMM30877.1
Pfam:pfam00005 ABC transporter; Belongs to the ABC transporter superfamily.
  
    0.630
Your Current Organism:
Sinomonas atrocyanea
NCBI taxonomy Id: 37927
Other names: ATCC 13752, Arthrobacter atricyaneus, Arthrobacter atrocyaneus, CIP 102365, DSM 20127, KCTC 3377, LMG 3814, LMG:3814, NBRC 12956, S. atrocyanea
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