STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMM32910.1Oxidoreductase; Pfam:pfam01408 Oxidoreductase family, NAD-binding Rossmann fold. (326 aa)    
Predicted Functional Partners:
AMM32909.1
Transcriptional regulator, LacI family; Pfam:pfam13377 Periplasmic binding protein-like domain.
       0.775
AMM32911.1
Hypothetical protein.
       0.773
AMM31227.1
Dehydrogenase; Pfam:pfam01408 Oxidoreductase family, NAD-binding Rossmann fold.
  
     0.741
AMM32187.1
Dehydrogenase; Pfam:pfam01408 Oxidoreductase family, NAD-binding Rossmann fold.
  
     0.733
AMM31834.1
Oxidoreductase domain protein; Pfam:pfam01408 Oxidoreductase family, NAD-binding Rossmann fold.
  
     0.661
AMM32185.1
Oxidoreductase domain protein; Pfam:pfam01408 Oxidoreductase family, NAD-binding Rossmann fold.
  
     0.629
AMM31110.1
Sugar phosphate isomerase/epimerase; Pfam:pfam01261 Xylose isomerase-like TIM barrel.
 
    0.624
AMM31234.1
Oxidoreductase; Pfam:pfam01408 Oxidoreductase family, NAD-binding Rossmann fold.
  
     0.602
AMM31165.1
Oxidoreductase domain protein; Pfam:pfam01408 Oxidoreductase family, NAD-binding Rossmann fold.
  
     0.594
AMM31229.1
Pfam:pfam01261 Xylose isomerase-like TIM barrel.
 
    0.593
Your Current Organism:
Sinomonas atrocyanea
NCBI taxonomy Id: 37927
Other names: ATCC 13752, Arthrobacter atricyaneus, Arthrobacter atrocyaneus, CIP 102365, DSM 20127, KCTC 3377, LMG 3814, LMG:3814, NBRC 12956, S. atrocyanea
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