STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDQ26058.1DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains. (236 aa)    
Predicted Functional Partners:
SDQ26044.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
 
 0.986
SDQ33238.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
 
 
 0.848
SDQ34586.1
Signal transduction histidine kinase.
 
 
 0.848
SDQ70722.1
Signal transduction histidine kinase.
 
 
 0.841
SDR07526.1
Signal transduction histidine kinase.
 
 
 0.841
SDQ70458.1
Signal transduction histidine kinase.
 
 0.830
SDR07424.1
Signal transduction histidine kinase.
 
 0.827
SDQ45187.1
Signal transduction histidine kinase.
 
 
 0.807
SDR10896.1
Regulatory protein, luxR family.
  
     0.536
SDQ26079.1
Hypothetical protein.
       0.523
Your Current Organism:
Arthrobacter crystallopoietes
NCBI taxonomy Id: 37928
Other names: A. crystallopoietes, ATCC 15481, CIP 102717, DSM 20117, IFO 14235, JCM 2522, LMG 3819, LMG:3819, NBRC 14235
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