STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDQ82044.1DNA-binding transcriptional regulator, FadR family. (229 aa)    
Predicted Functional Partners:
SDQ82021.1
MFS transporter, CP family, cyanate transporter.
 
     0.818
SDQ38799.1
DNA-binding transcriptional regulator, GntR family.
  
  
 0.762
SDQ39556.1
DNA-binding transcriptional regulator, GntR family.
  
  
 0.761
SDR29611.1
DNA-binding transcriptional regulator, GntR family.
  
  
 0.760
SDQ42752.1
DNA-binding transcriptional regulator, GntR family.
  
  
 0.759
SDQ40566.1
DNA-binding transcriptional regulator, FadR family.
  
     0.757
SDQ42489.1
DNA-binding transcriptional regulator, GntR family.
  
  
 0.756
SDQ41640.1
DNA-binding transcriptional regulator, GntR family.
  
  
 0.750
SDR29025.1
DNA-binding transcriptional regulator, GntR family.
  
  
 0.750
SDQ27924.1
DNA-binding transcriptional regulator, GntR family.
  
  
 0.747
Your Current Organism:
Arthrobacter crystallopoietes
NCBI taxonomy Id: 37928
Other names: A. crystallopoietes, ATCC 15481, CIP 102717, DSM 20117, IFO 14235, JCM 2522, LMG 3819, LMG:3819, NBRC 14235
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.