STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDQ82512.1Hypothetical protein. (195 aa)    
Predicted Functional Partners:
SDQ82420.1
fatty-acyl-CoA synthase.
   
 0.638
SDQ82491.1
DNA-binding transcriptional regulator, AcrR family.
       0.580
SDQ82537.1
Putative oxidoreductase.
  
    0.529
rplF
LSU ribosomal protein L6P; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.
   
 0.521
SDQ61347.1
Hypothetical protein.
  
     0.491
SDQ44693.1
Cytochrome P450.
 
 
  0.483
SDR20811.1
Magnesium transporter NIPA.
 
  
 0.477
SDQ82463.1
3-hydroxyacyl-CoA dehydrogenase.
       0.466
SDQ82439.1
glutaryl-CoA dehydrogenase.
       0.461
SDR08144.1
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II.
    
 0.427
Your Current Organism:
Arthrobacter crystallopoietes
NCBI taxonomy Id: 37928
Other names: A. crystallopoietes, ATCC 15481, CIP 102717, DSM 20117, IFO 14235, JCM 2522, LMG 3819, LMG:3819, NBRC 14235
Server load: low (18%) [HD]