STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDR09296.1Hypothetical protein. (509 aa)    
Predicted Functional Partners:
SDR20838.1
Putative Holin-X, holin superfamily III.
 
    0.737
SDQ53385.1
Predicted alpha-1,6-mannanase, GH76 family.
  
     0.733
SDQ65918.1
Hypothetical protein.
 
 
 0.727
SDQ35241.1
Hypothetical protein.
  
     0.715
SDR12524.1
Sporulation and spore germination; Manually curated.
  
     0.617
SDQ32639.1
Integral membrane protein TIGR01906.
  
     0.611
SDR11002.1
Lipoate-protein ligase A.
  
     0.599
SDQ25637.1
Protein of unknown function.
  
     0.583
SDQ88589.1
Colicin V production protein.
 
 
 0.554
SDR09348.1
Teichoic acid transport system ATP-binding protein.
  
  
 0.549
Your Current Organism:
Arthrobacter crystallopoietes
NCBI taxonomy Id: 37928
Other names: A. crystallopoietes, ATCC 15481, CIP 102717, DSM 20117, IFO 14235, JCM 2522, LMG 3819, LMG:3819, NBRC 14235
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.