STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDR29105.1Transcriptional regulator, IclR family. (527 aa)    
Predicted Functional Partners:
SDQ42466.1
DNA-binding transcriptional regulator, IclR family.
  
     0.774
SDR30427.1
DNA-binding transcriptional regulator, IclR family.
  
     0.773
SDQ54781.1
Transcriptional regulator, IclR family.
  
     0.772
SDQ56604.1
DNA-binding transcriptional regulator, IclR family.
  
     0.768
SDQ78393.1
DNA-binding transcriptional regulator, IclR family.
  
     0.753
SDQ69559.1
Sensor histidine kinase inhibitor, KipI family.
  
    0.694
SDR29095.1
Phenylpropionate dioxygenase, large terminal subunit.
       0.508
SDR29129.1
Sugar phosphate permease.
  
    0.507
SDR21214.1
DNA-binding transcriptional regulator, IclR family.
  
     0.505
SDR29084.1
Threonine dehydrogenase.
       0.467
Your Current Organism:
Arthrobacter crystallopoietes
NCBI taxonomy Id: 37928
Other names: A. crystallopoietes, ATCC 15481, CIP 102717, DSM 20117, IFO 14235, JCM 2522, LMG 3819, LMG:3819, NBRC 14235
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