STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MAP2Methionine aminopeptidase 2; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val); Belongs to the peptidase M24A family. Methionine aminopeptidase eukaryotic type 2 subfamily. (473 aa)    
Predicted Functional Partners:
LELG_05733
Methionine aminopeptidase; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val).
    
 0.986
LELG_02847
60S ribosomal protein L35.
  
 
 0.812
LELG_05079
60S ribosomal protein L5.
  
 
 0.805
LELG_04783
60S ribosomal protein L25.
  
 
 0.782
LELG_03208
Zn(2)-C6 fungal-type domain-containing protein.
    
 0.752
LELG_03255
40S ribosomal protein S3.
  
 
 0.748
LELG_04237
Glycylpeptide N-tetradecanoyltransferase; Adds a myristoyl group to the N-terminal glycine residue of certain cellular proteins; Belongs to the NMT family.
   
 
 0.732
LELG_02908
40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
  
   0.702
LELG_01721
60S ribosomal protein L7.
  
 
 0.691
LELG_03204
Ribosome biogenesis protein RLP7.
  
 
 0.691
Your Current Organism:
Lodderomyces elongisporus
NCBI taxonomy Id: 379508
Other names: L. elongisporus NRRL YB-4239, Lodderomyces elongisporus NRRL YB-4239
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.