STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LELG_00357Glutamate decarboxylase; Belongs to the group II decarboxylase family. (565 aa)    
Predicted Functional Partners:
LELG_01933
NAD-specific glutamate dehydrogenase; NAD(+)-dependent glutamate dehydrogenase which degrades glutamate to ammonia and alpha-ketoglutarate. Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
   
 
 0.960
LELG_01027
4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 0.959
LELG_01273
4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 0.959
LELG_03249
Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family.
   
 0.940
LELG_04591
Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
   
 
 0.939
LELG_00115
Uncharacterized protein.
  
 
 0.934
LELG_01092
Potassium-activated aldehyde dehydrogenase, mitochondrial; Belongs to the aldehyde dehydrogenase family.
   
 0.932
LELG_01093
Aldehyde dehydrogenase, mitochondrial; Belongs to the aldehyde dehydrogenase family.
   
 0.932
LELG_01444
Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family.
   
 0.928
LELG_05045
Aldedh domain-containing protein.
   
 0.928
Your Current Organism:
Lodderomyces elongisporus
NCBI taxonomy Id: 379508
Other names: L. elongisporus NRRL YB-4239, Lodderomyces elongisporus NRRL YB-4239
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