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rnpA protein (Pseudomonas stutzeri) - STRING interaction network
"rnpA" - Ribonuclease P in Pseudomonas stutzeri
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
rnpARibonuclease P; RNaseP catalyzes the removal of the 5’-leader sequence from pre-tRNA to produce the mature 5’-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5’-leader sequence and broadening the substrate specificity of the ribozyme (131 aa)    
Predicted Functional Partners:
rnt
Ribonuclease T; Trims short 3’ overhangs of a variety of RNA species, leaving a one or two nucleotide 3’ overhang. Responsible for the end-turnover of tRNA- specifically removes the terminal AMP residue from uncharged tRNA (tRNA-C-C-A). Also appears to be involved in tRNA biosynthesis (203 aa)
   
 
    0.982
cca
tRNA nucleotidyl transferase; Catalyzes the addition and repair of the essential 3’- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate (465 aa)
   
 
  0.980
rpmH
50S ribosomal protein L34 (44 aa)
   
   
  0.980
rne
Ribonuclease E; Endoribonuclease that plays a central role in RNA processing and decay. Required for the maturation of 5S and 16S rRNAs and the majority of tRNAs. Also involved in the degradation of most mRNAs (1070 aa)
   
 
  0.974
rph
Ribonuclease PH; Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates (240 aa)
     
 
  0.973
rnd
Ribonuclease D; Exonuclease involved in the 3’ processing of various precursor tRNAs. Initiates hydrolysis at the 3’-terminus of an RNA molecule and releases 5’-mononucleotides (401 aa)
         
    0.970
PST_2825
Ribonuclease (391 aa)
         
    0.970
yidC
Putative inner membrane protein translocase component YidC; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins (556 aa)
 
   
  0.958
PST_4212
Hypothetical protein; Could be involved in insertion of integral membrane proteins into the membrane (81 aa)
   
   
  0.946
PST_2274
Ribonuclease D (127 aa)
       
    0.930
Your Current Organism:
Pseudomonas stutzeri
NCBI taxonomy Id: 379731
Other names: Achromobacter sewerinii, Achromobacter stutzeri, Bacillus denitrificans II, Bacillus nitrogenes, Bacillus stutzeri, Bacterium stutzeri, P. stutzeri, P. stutzeri A1501, P. stutzeri group, P. stutzeri subgroup, Pseudomonas perfectimarina, Pseudomonas perfectomarina, Pseudomonas perfectomarinus, Pseudomonas sp. CECRI-25/07, Pseudomonas stutzeri, Pseudomonas stutzeri A1501, Pseudomonas stutzeri group, Pseudomonas stutzeri str. A1501, Pseudomonas stutzeri strain A1501, Pseudomonas stutzeri subgroup
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