STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDK57773.150S ribosome-binding GTPase. (527 aa)    
Predicted Functional Partners:
SDK57815.1
Dynamin family protein.
 
     0.951
gpsA
Glycerol 3-phosphate dehydrogenase (NAD(P)+); Manually curated; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
  
  
 0.820
SDK85203.1
Dynamin family protein.
 
     0.792
dnaG
DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.
   
    0.779
SDK57790.1
Hypothetical protein.
       0.774
SDK85177.1
GrpE protein; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent i [...]
 
  
 0.743
SDK57839.1
Hsp70 protein; Belongs to the heat shock protein 70 family.
  
    0.689
cmk
Cytidylate kinase.
  
  
 0.681
SDL24698.1
GTP-binding protein.
   
  
 0.666
SDK68977.1
Phage shock protein A (PspA) family protein.
  
    0.659
Your Current Organism:
Glycomyces sambucus
NCBI taxonomy Id: 380244
Other names: CGMCC 4.3147, DSM 45047, G. sambucus, Glycomyces sambucus Gu et al. 2007, Glycomyces sp. E71, JCM 15472, strain E71
Server load: low (28%) [HD]