STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFE21824.1Putative ABC transport system ATP-binding protein. (310 aa)    
Predicted Functional Partners:
SFE21807.1
Putative ABC transport system permease protein.
  0.998
SFF49584.1
Putative ABC transport system permease protein.
  
 0.993
SFE21849.1
Membrane fusion protein, macrolide-specific efflux system.
 
 
 0.989
SFF09160.1
Putative ABC transport system permease protein.
 
  0.801
SFE21787.1
Hypothetical protein.
 
     0.799
SFF47757.1
Putative ABC transport system permease protein.
  
  0.741
SFF17128.1
FtsX-like permease family protein.
 
  0.699
SFF29075.1
Putative ABC transport system permease protein.
  
  0.698
SFF49209.1
ABC-type antimicrobial peptide transport system, permease component.
  
  0.698
SFE45158.1
Putative ABC transport system permease protein.
  
  0.677
Your Current Organism:
Streptomyces alni
NCBI taxonomy Id: 380248
Other names: CGMCC 4.3510, JCM 16122, NRRL B-24611, S. alni, Streptomyces alni Liu et al. 2009, Streptomyces sp. D65, strain D65
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