Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CHGG_01131 | CHGG_01756 | Q2HF73 | Q2HDE8 | SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | Uncharacterized protein. | 0.997 |
CHGG_01131 | CHGG_04287 | Q2HF73 | Q2H1Q9 | SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | Brix domain-containing protein. | 0.908 |
CHGG_01131 | CHGG_05634 | Q2HF73 | Q2H6T1 | SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | Uncharacterized protein. | 0.966 |
CHGG_01131 | CHGG_09141 | Q2HF73 | Q2GSB3 | SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | Uncharacterized protein. | 0.872 |
CHGG_01131 | CHGG_10382 | Q2HF73 | Q2GNS2 | SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | RRM domain-containing protein. | 0.995 |
CHGG_01131 | DRS1 | Q2HF73 | P0C2N7 | SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | ATP-dependent RNA helicase DRS1; ATP-binding RNA helicase involved in ribosome assembly. | 0.952 |
CHGG_01131 | ERB1 | Q2HF73 | Q2HDW0 | SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.996 |
CHGG_01131 | NOP7 | Q2HF73 | Q2HCV1 | SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.987 |
CHGG_01131 | SPB1 | Q2HF73 | Q2HB51 | SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. | 0.994 |
CHGG_01131 | YTM1 | Q2HF73 | Q2GXT0 | SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.988 |
CHGG_01756 | CHGG_01131 | Q2HDE8 | Q2HF73 | Uncharacterized protein. | SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | 0.997 |
CHGG_01756 | CHGG_04287 | Q2HDE8 | Q2H1Q9 | Uncharacterized protein. | Brix domain-containing protein. | 0.942 |
CHGG_01756 | CHGG_05634 | Q2HDE8 | Q2H6T1 | Uncharacterized protein. | Uncharacterized protein. | 0.960 |
CHGG_01756 | CHGG_09141 | Q2HDE8 | Q2GSB3 | Uncharacterized protein. | Uncharacterized protein. | 0.894 |
CHGG_01756 | CHGG_10382 | Q2HDE8 | Q2GNS2 | Uncharacterized protein. | RRM domain-containing protein. | 0.996 |
CHGG_01756 | DRS1 | Q2HDE8 | P0C2N7 | Uncharacterized protein. | ATP-dependent RNA helicase DRS1; ATP-binding RNA helicase involved in ribosome assembly. | 0.934 |
CHGG_01756 | ERB1 | Q2HDE8 | Q2HDW0 | Uncharacterized protein. | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.996 |
CHGG_01756 | NOP7 | Q2HDE8 | Q2HCV1 | Uncharacterized protein. | Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.997 |
CHGG_01756 | SPB1 | Q2HDE8 | Q2HB51 | Uncharacterized protein. | AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. | 0.990 |
CHGG_01756 | YTM1 | Q2HDE8 | Q2GXT0 | Uncharacterized protein. | Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.988 |
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