STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHA_1884Pterin-4-alpha-carbinolamine dehydratase; Identified by match to protein family HMM PF01329. (112 aa)    
Predicted Functional Partners:
phhA
Phenylalanine-4-hydroxylase; Identified by match to protein family HMM PF00351; match to protein family HMM TIGR01267.
 
 0.994
hppD
4-hydroxyphenylpyruvate dioxygenase; Identified by match to protein family HMM PF00903; match to protein family HMM TIGR01263.
  
  
 0.740
AHA_1885
Pterin-4-alpha-carbinolamine dehydratase.
      
0.714
hmgA
Homogentisate 1,2-dioxygenase; Identified by match to protein family HMM PF04209.
  
  
 0.603
tyrR
Transcriptional regulatory protein TyrR; Identified by similarity to SP:P07604; match to protein family HMM PF00158; match to protein family HMM PF01842.
     
 0.584
AHA_0624
Aromatic-amino-acid aminotransferase; Identified by match to protein family HMM PF00155.
  
  
 0.505
aspC
Aspartate aminotransferase; Identified by match to protein family HMM PF00155.
  
  
 0.505
AHA_1882
Conserved hypothetical protein; Identified by match to protein family HMM PF05128; match to protein family HMM TIGR01620.
       0.437
maiA
Maleylacetoacetate isomerase; Identified by match to protein family HMM PF02798; match to protein family HMM TIGR01262.
  
  
 0.437
gph-2
Phosphoglycolate phosphatase, bacterial; Specifically catalyzes the dephosphorylation of 2- phosphoglycolate. Is involved in the dissimilation of the intracellular 2-phosphoglycolate formed during the DNA repair of 3'-phosphoglycolate ends, a major class of DNA lesions induced by oxidative stress. Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family.
  
  
 0.417
Your Current Organism:
Aeromonas hydrophila
NCBI taxonomy Id: 380703
Other names: A. hydrophila subsp. hydrophila ATCC 7966, Aeromonas hydrophila subsp. hydrophila ATCC 7966, Aeromonas hydrophila subsp. hydrophila str. ATCC 7966, Aeromonas hydrophila subsp. hydrophila strain ATCC 7966
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.