STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
phnXPhosphonoacetaldehyde hydrolase; Involved in phosphonate degradation; Belongs to the HAD-like hydrolase superfamily. PhnX family. (279 aa)    
Predicted Functional Partners:
phnW
2-aminoethylphosphonate--pyruvate transaminase; Involved in phosphonate degradation; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. PhnW subfamily.
  
 0.999
AHA_1936
ABC transporter, periplasmic binding protein; Identified by match to protein family HMM PF01547.
 
   
 0.856
AHA_1939
Acetylornithine aminotransferase; Identified by match to protein family HMM PF00202; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
     0.848
AHA_1934
ABC transporter, permease protein; Identified by match to protein family HMM PF00528.
 
     0.831
AHA_1937
2-aminoethylphosphonate transport, repressor; Identified by match to protein family HMM PF00392; match to protein family HMM PF07702.
 
  
 0.738
AHA_0031
ABC-type Fe3+ transport system, periplasmic component; Identified by match to protein family HMM PF01547.
 
   
 0.623
AHA_2616
Aldehyde-alcohol dehydrogenase; Identified by match to protein family HMM PF00171; match to protein family HMM PF00465; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
    
 0.533
eutE
Acetaldehyde dehydrogenase (acetylating); Identified by match to protein family HMM PF00171; match to protein family HMM TIGR02518.
    
  0.501
AHA_1935
Ferric cations import ATP-binding protein FbpC 2; Identified by match to protein family HMM PF00005; Belongs to the ABC transporter superfamily.
 
     0.459
hcaT
MFS transporter, phenyl propionate permease (PPP) family; Identified by match to protein family HMM PF01306; match to protein family HMM PF07690.
 
  
 0.447
Your Current Organism:
Aeromonas hydrophila
NCBI taxonomy Id: 380703
Other names: A. hydrophila subsp. hydrophila ATCC 7966, Aeromonas hydrophila subsp. hydrophila ATCC 7966, Aeromonas hydrophila subsp. hydrophila str. ATCC 7966, Aeromonas hydrophila subsp. hydrophila strain ATCC 7966
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