node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AHA_0123 | tnaA | AHA_0123 | AHA_1963 | Low affinity tryptophan permease; Identified by match to protein family HMM PF03222; match to protein family HMM TIGR00837. | Tyrosine phenol-lyase; Identified by match to protein family HMM PF01212; Belongs to the beta-eliminating lyase family. | 0.480 |
AHA_0465 | tnaA | AHA_0465 | AHA_1963 | Proteinase inhibitor; Identified by match to protein family HMM PF03692. | Tyrosine phenol-lyase; Identified by match to protein family HMM PF01212; Belongs to the beta-eliminating lyase family. | 0.444 |
AHA_1127 | luxS | AHA_1127 | AHA_0700 | 4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis enzyme; Identified by match to protein family HMM PF01965; match to protein family HMM TIGR01383. | S-Ribosylhomocysteinase (LuxS); Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5-dihydroxy-2,3-pentadione (DPD). Belongs to the LuxS family. | 0.408 |
AHA_1127 | tnaA | AHA_1127 | AHA_1963 | 4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis enzyme; Identified by match to protein family HMM PF01965; match to protein family HMM TIGR01383. | Tyrosine phenol-lyase; Identified by match to protein family HMM PF01212; Belongs to the beta-eliminating lyase family. | 0.669 |
AHA_1316 | tnaA | AHA_1316 | AHA_1963 | Identified by match to protein family HMM PF01575. | Tyrosine phenol-lyase; Identified by match to protein family HMM PF01212; Belongs to the beta-eliminating lyase family. | 0.570 |
AHA_3285 | tnaA | AHA_3285 | AHA_1963 | TtrA; Identified by match to protein family HMM PF01568; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Tyrosine phenol-lyase; Identified by match to protein family HMM PF01212; Belongs to the beta-eliminating lyase family. | 0.530 |
MotB | luxS | AHA_3317 | AHA_0700 | Sodium-driven polar flagellar protein; Identified by match to protein family HMM PF00691. | S-Ribosylhomocysteinase (LuxS); Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5-dihydroxy-2,3-pentadione (DPD). Belongs to the LuxS family. | 0.431 |
MotB | tnaA | AHA_3317 | AHA_1963 | Sodium-driven polar flagellar protein; Identified by match to protein family HMM PF00691. | Tyrosine phenol-lyase; Identified by match to protein family HMM PF01212; Belongs to the beta-eliminating lyase family. | 0.442 |
hchA | tnaA | AHA_3120 | AHA_1963 | Chaperone protein HchA; Identified by match to protein family HMM PF01965. | Tyrosine phenol-lyase; Identified by match to protein family HMM PF01212; Belongs to the beta-eliminating lyase family. | 0.444 |
luxS | AHA_1127 | AHA_0700 | AHA_1127 | S-Ribosylhomocysteinase (LuxS); Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5-dihydroxy-2,3-pentadione (DPD). Belongs to the LuxS family. | 4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis enzyme; Identified by match to protein family HMM PF01965; match to protein family HMM TIGR01383. | 0.408 |
luxS | MotB | AHA_0700 | AHA_3317 | S-Ribosylhomocysteinase (LuxS); Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5-dihydroxy-2,3-pentadione (DPD). Belongs to the LuxS family. | Sodium-driven polar flagellar protein; Identified by match to protein family HMM PF00691. | 0.431 |
luxS | tnaA | AHA_0700 | AHA_1963 | S-Ribosylhomocysteinase (LuxS); Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5-dihydroxy-2,3-pentadione (DPD). Belongs to the LuxS family. | Tyrosine phenol-lyase; Identified by match to protein family HMM PF01212; Belongs to the beta-eliminating lyase family. | 0.442 |
pcnB | prc | AHA_3536 | AHA_2291 | poly(A) polymerase; Adds poly(A) tail to the 3' end of many RNAs, which usually targets these RNAs for decay. Plays a significant role in the global control of gene expression, through influencing the rate of transcript degradation, and in the general RNA quality control. Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. | C-terminal processing peptidase; Identified by similarity to SP:P23865; match to protein family HMM PF00595; match to protein family HMM PF03572; match to protein family HMM TIGR00225; Belongs to the peptidase S41A family. | 0.548 |
pcnB | tnaA | AHA_3536 | AHA_1963 | poly(A) polymerase; Adds poly(A) tail to the 3' end of many RNAs, which usually targets these RNAs for decay. Plays a significant role in the global control of gene expression, through influencing the rate of transcript degradation, and in the general RNA quality control. Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. | Tyrosine phenol-lyase; Identified by match to protein family HMM PF01212; Belongs to the beta-eliminating lyase family. | 0.525 |
prc | pcnB | AHA_2291 | AHA_3536 | C-terminal processing peptidase; Identified by similarity to SP:P23865; match to protein family HMM PF00595; match to protein family HMM PF03572; match to protein family HMM TIGR00225; Belongs to the peptidase S41A family. | poly(A) polymerase; Adds poly(A) tail to the 3' end of many RNAs, which usually targets these RNAs for decay. Plays a significant role in the global control of gene expression, through influencing the rate of transcript degradation, and in the general RNA quality control. Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. | 0.548 |
prc | tnaA | AHA_2291 | AHA_1963 | C-terminal processing peptidase; Identified by similarity to SP:P23865; match to protein family HMM PF00595; match to protein family HMM PF03572; match to protein family HMM TIGR00225; Belongs to the peptidase S41A family. | Tyrosine phenol-lyase; Identified by match to protein family HMM PF01212; Belongs to the beta-eliminating lyase family. | 0.441 |
tnaA | AHA_0123 | AHA_1963 | AHA_0123 | Tyrosine phenol-lyase; Identified by match to protein family HMM PF01212; Belongs to the beta-eliminating lyase family. | Low affinity tryptophan permease; Identified by match to protein family HMM PF03222; match to protein family HMM TIGR00837. | 0.480 |
tnaA | AHA_0465 | AHA_1963 | AHA_0465 | Tyrosine phenol-lyase; Identified by match to protein family HMM PF01212; Belongs to the beta-eliminating lyase family. | Proteinase inhibitor; Identified by match to protein family HMM PF03692. | 0.444 |
tnaA | AHA_1127 | AHA_1963 | AHA_1127 | Tyrosine phenol-lyase; Identified by match to protein family HMM PF01212; Belongs to the beta-eliminating lyase family. | 4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis enzyme; Identified by match to protein family HMM PF01965; match to protein family HMM TIGR01383. | 0.669 |
tnaA | AHA_1316 | AHA_1963 | AHA_1316 | Tyrosine phenol-lyase; Identified by match to protein family HMM PF01212; Belongs to the beta-eliminating lyase family. | Identified by match to protein family HMM PF01575. | 0.570 |