node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AHA_1566 | AHA_2436 | AHA_1566 | AHA_2436 | Membrane-bound lytic murein transglycosylase D; Identified by match to protein family HMM PF01464; match to protein family HMM PF01476; match to protein family HMM PF06474. | Identified by match to protein family HMM PF00293. | 0.451 |
AHA_2434 | AHA_2436 | AHA_2434 | AHA_2436 | Fumarate hydratase, class I; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | Identified by match to protein family HMM PF00293. | 0.529 |
AHA_2434 | pabB | AHA_2434 | AHA_2435 | Fumarate hydratase, class I; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | Para-aminobenzoate synthase, component I; Identified by match to protein family HMM PF00425; match to protein family HMM PF04715; match to protein family HMM TIGR00553. | 0.713 |
AHA_2436 | AHA_1566 | AHA_2436 | AHA_1566 | Identified by match to protein family HMM PF00293. | Membrane-bound lytic murein transglycosylase D; Identified by match to protein family HMM PF01464; match to protein family HMM PF01476; match to protein family HMM PF06474. | 0.451 |
AHA_2436 | AHA_2434 | AHA_2436 | AHA_2434 | Identified by match to protein family HMM PF00293. | Fumarate hydratase, class I; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | 0.529 |
AHA_2436 | AHA_2437 | AHA_2436 | AHA_2437 | Identified by match to protein family HMM PF00293. | Identified by similarity to SP:P0AAD6; match to protein family HMM PF01490; match to protein family HMM PF03222. | 0.460 |
AHA_2436 | birA | AHA_2436 | AHA_4040 | Identified by match to protein family HMM PF00293. | BirA bifunctional protein; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio-5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon. | 0.606 |
AHA_2436 | dapF | AHA_2436 | AHA_0474 | Identified by match to protein family HMM PF00293. | Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan. | 0.482 |
AHA_2436 | pabB | AHA_2436 | AHA_2435 | Identified by match to protein family HMM PF00293. | Para-aminobenzoate synthase, component I; Identified by match to protein family HMM PF00425; match to protein family HMM PF04715; match to protein family HMM TIGR00553. | 0.652 |
AHA_2436 | rnr | AHA_2436 | AHA_0702 | Identified by match to protein family HMM PF00293. | Ribonuclease R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs. | 0.569 |
AHA_2436 | rph | AHA_2436 | AHA_4224 | Identified by match to protein family HMM PF00293. | Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.438 |
AHA_2437 | AHA_2436 | AHA_2437 | AHA_2436 | Identified by similarity to SP:P0AAD6; match to protein family HMM PF01490; match to protein family HMM PF03222. | Identified by match to protein family HMM PF00293. | 0.460 |
birA | AHA_2436 | AHA_4040 | AHA_2436 | BirA bifunctional protein; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio-5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon. | Identified by match to protein family HMM PF00293. | 0.606 |
birA | dapF | AHA_4040 | AHA_0474 | BirA bifunctional protein; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio-5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon. | Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan. | 0.507 |
dapF | AHA_2436 | AHA_0474 | AHA_2436 | Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan. | Identified by match to protein family HMM PF00293. | 0.482 |
dapF | birA | AHA_0474 | AHA_4040 | Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan. | BirA bifunctional protein; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio-5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon. | 0.507 |
pabB | AHA_2434 | AHA_2435 | AHA_2434 | Para-aminobenzoate synthase, component I; Identified by match to protein family HMM PF00425; match to protein family HMM PF04715; match to protein family HMM TIGR00553. | Fumarate hydratase, class I; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | 0.713 |
pabB | AHA_2436 | AHA_2435 | AHA_2436 | Para-aminobenzoate synthase, component I; Identified by match to protein family HMM PF00425; match to protein family HMM PF04715; match to protein family HMM TIGR00553. | Identified by match to protein family HMM PF00293. | 0.652 |
rnr | AHA_2436 | AHA_0702 | AHA_2436 | Ribonuclease R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs. | Identified by match to protein family HMM PF00293. | 0.569 |
rnr | rph | AHA_0702 | AHA_4224 | Ribonuclease R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs. | Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.982 |