STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHA_2894Glycosyl transferase, group 1; Identified by match to protein family HMM PF00534. (374 aa)    
Predicted Functional Partners:
AHA_2899
RfbE, O-antigen export system ATP-binding protein RfbE; Identified by match to protein family HMM PF00005.
 
 
 0.884
AHA_2900
ABC transporter, permease protein; Identified by match to protein family HMM PF01061.
 
  
 0.863
AHA_2891
WbgZ; Identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF07993.
  
  
 0.837
AHA_2897
Glycosyl transferase, group 1 family protein; Identified by match to protein family HMM PF00534.
 
     0.824
AHA_2893
UDP-glucose 4-epimerase; Identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF03447; match to protein family HMM PF04321; match to protein family HMM PF07993.
  
  
 0.810
AHA_2904
Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; Identified by match to protein family HMM PF00483; match to protein family HMM PF01050; match to protein family HMM PF07883; match to protein family HMM TIGR01479; Belongs to the mannose-6-phosphate isomerase type 2 family.
 
  
 0.807
AHA_2898
Putative glycosytransferase.
 
     0.800
AHA_2895
GDP-mannose mannosyl hydrolase; Identified by match to protein family HMM PF00293.
  
  
 0.799
AHA_2896
Acetyltransferase; Identified by match to protein family HMM PF00132.
  
  
 0.794
AHA_2892
Glycosyl transferase, group 4 family protein; Identified by match to protein family HMM PF00953.
  
  
 0.782
Your Current Organism:
Aeromonas hydrophila
NCBI taxonomy Id: 380703
Other names: A. hydrophila subsp. hydrophila ATCC 7966, Aeromonas hydrophila subsp. hydrophila ATCC 7966, Aeromonas hydrophila subsp. hydrophila str. ATCC 7966, Aeromonas hydrophila subsp. hydrophila strain ATCC 7966
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.