node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AHA_3242 | corC | AHA_3242 | AHA_3244 | Identified by match to protein family HMM PF00013; match to protein family HMM PF02562. | Magnesium and cobalt efflux protein CorC; Identified by similarity to SP:P0A2L3; match to protein family HMM PF00571; match to protein family HMM PF03471. | 0.792 |
AHA_3242 | era | AHA_3242 | AHA_0801 | Identified by match to protein family HMM PF00013; match to protein family HMM PF02562. | GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | 0.606 |
AHA_3242 | ybeY | AHA_3242 | AHA_3243 | Identified by match to protein family HMM PF00013; match to protein family HMM PF02562. | Conserved hypothetical protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.985 |
corC | AHA_3242 | AHA_3244 | AHA_3242 | Magnesium and cobalt efflux protein CorC; Identified by similarity to SP:P0A2L3; match to protein family HMM PF00571; match to protein family HMM PF03471. | Identified by match to protein family HMM PF00013; match to protein family HMM PF02562. | 0.792 |
corC | ybeY | AHA_3244 | AHA_3243 | Magnesium and cobalt efflux protein CorC; Identified by similarity to SP:P0A2L3; match to protein family HMM PF00571; match to protein family HMM PF03471. | Conserved hypothetical protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.881 |
dgkA | era | AHA_2732 | AHA_0801 | Diacylglycerol kinase; Recycling of diacylglycerol produced during the turnover of membrane phospholipid. | GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | 0.465 |
dgkA | ybeY | AHA_2732 | AHA_3243 | Diacylglycerol kinase; Recycling of diacylglycerol produced during the turnover of membrane phospholipid. | Conserved hypothetical protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.791 |
era | AHA_3242 | AHA_0801 | AHA_3242 | GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | Identified by match to protein family HMM PF00013; match to protein family HMM PF02562. | 0.606 |
era | dgkA | AHA_0801 | AHA_2732 | GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | Diacylglycerol kinase; Recycling of diacylglycerol produced during the turnover of membrane phospholipid. | 0.465 |
era | ybeY | AHA_0801 | AHA_3243 | GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | Conserved hypothetical protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.918 |
gcvP | ybeY | AHA_1720 | AHA_3243 | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | Conserved hypothetical protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.819 |
rplK | rplQ | AHA_4032 | AHA_0334 | Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | Ribosomal protein L17; Identified by match to protein family HMM PF01196; match to protein family HMM TIGR00059. | 0.994 |
rplK | rplU | AHA_4032 | AHA_0930 | Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.993 |
rplK | rplX | AHA_4032 | AHA_0320 | Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | Ribosomal protein L24; One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | 0.995 |
rplK | rpsQ | AHA_4032 | AHA_0318 | Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | Ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. | 0.997 |
rplK | ybeY | AHA_4032 | AHA_3243 | Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | Conserved hypothetical protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.806 |
rplQ | rplK | AHA_0334 | AHA_4032 | Ribosomal protein L17; Identified by match to protein family HMM PF01196; match to protein family HMM TIGR00059. | Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | 0.994 |
rplQ | rplU | AHA_0334 | AHA_0930 | Ribosomal protein L17; Identified by match to protein family HMM PF01196; match to protein family HMM TIGR00059. | Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.992 |
rplQ | rplX | AHA_0334 | AHA_0320 | Ribosomal protein L17; Identified by match to protein family HMM PF01196; match to protein family HMM TIGR00059. | Ribosomal protein L24; One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | 0.996 |
rplQ | rpsQ | AHA_0334 | AHA_0318 | Ribosomal protein L17; Identified by match to protein family HMM PF01196; match to protein family HMM TIGR00059. | Ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. | 0.996 |