STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHA_3280Glycosyltransferase, MGT family; Identified by match to protein family HMM PF00201; match to protein family HMM TIGR01426. (427 aa)    
Predicted Functional Partners:
AHA_3282
Pyoverdine chromophore biosynthetic protein PvcA; Identified by similarity to GB:AAC21671.1; match to protein family HMM PF05141.
 
     0.880
AHA_3281
Pyoverdine chromophore biosynthetic protein PvcB; Identified by similarity to GB:AAC21672.1; match to protein family HMM PF02668.
 
     0.875
gshB
Glutathione synthase; Identified by match to protein family HMM PF02951; match to protein family HMM PF02955; match to protein family HMM TIGR01380; Belongs to the prokaryotic GSH synthase family.
      
 0.680
AHA_2477
Isochorismatase; Identified by similarity to SP:P15048; match to protein family HMM PF00550; match to protein family HMM PF00857.
  
  
 0.607
AHA_1957
Identified by match to protein family HMM PF01075.
  
   
 0.586
AHA_0167
Heptosyltransferase; Identified by match to protein family HMM PF01075.
      
 0.530
cyaA
Adenylate cyclase, class I; Identified by similarity to SP:P00936; match to protein family HMM PF01295; Belongs to the adenylyl cyclase class-1 family.
      
 0.528
AHA_1305
Protease LasA; Identified by match to protein family HMM PF01551.
  
    0.487
AHA_2940
Secretory tripeptidyl aminopeptidase, putative; Identified by match to protein family HMM PF00561.
 
    0.467
AHA_0744
Valanimycin resistance, putative; Identified by match to protein family HMM PF07690.
  
   
 0.446
Your Current Organism:
Aeromonas hydrophila
NCBI taxonomy Id: 380703
Other names: A. hydrophila subsp. hydrophila ATCC 7966, Aeromonas hydrophila subsp. hydrophila ATCC 7966, Aeromonas hydrophila subsp. hydrophila str. ATCC 7966, Aeromonas hydrophila subsp. hydrophila strain ATCC 7966
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