STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C5DGT0_LACTCKLTH0D07986p; Belongs to the ubiquitin-conjugating enzyme family. (165 aa)    
Predicted Functional Partners:
C5DDW8_LACTC
KLTH0C04400p.
    
 
 0.992
C5DE67_LACTC
KLTH0C06688p.
    
0.985
C5DLW8_LACTC
KLTH0G04136p.
   
 
 0.978
C5DEN1_LACTC
KLTH0C10604p.
    
 
 0.959
C5DDM8_LACTC
ER membrane protein complex subunit 3; The EMC seems to be required for efficient folding of proteins in the endoplasmic reticulum (ER).
    
 
 0.957
C5DLI8_LACTC
ER membrane protein complex subunit 4; Belongs to the EMC4 family.
    
   0.953
C5DC89_LACTC
KLTH0B01078p; Belongs to the ubiquitin-activating E1 family.
    
 0.902
C5DHN8_LACTC
KLTH0E05852p.
    
 0.858
C5DHI1_LACTC
KLTH0E04510p.
    
 
 0.807
C5E212_LACTC
KLTH0H01320p.
    
 
 0.733
Your Current Organism:
Lachancea thermotolerans
NCBI taxonomy Id: 559295
Other names: Kluyveromyces thermotolerans CBS 6340, L. thermotolerans CBS 6340, Lachancea thermotolerans CBS 6340
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.