STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C5DFF4_LACTCKLTH0D14652p. (634 aa)    
Predicted Functional Partners:
C5DMQ0_LACTC
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 
 0.870
C5DF86_LACTC
KLTH0D13090p.
    
 
 0.809
C5DHZ9_LACTC
KLTH0E08536p.
    
 
 0.784
C5DGV5_LACTC
KLTH0D08602p.
   
 
 0.708
C5DMP9_LACTC
Histone H3; Belongs to the histone H3 family.
   
 
 0.708
C5DHD5_LACTC
KLTH0E03476p.
   
 
 0.703
C5DD95_LACTC
KLTH0B09372p.
    
 
 0.694
C5E3D8_LACTC
KLTH0H12562p.
    
 
 0.694
C5DKY6_LACTC
RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.
 
  
 
 0.658
C5DEN3_LACTC
Histone H2A; Belongs to the histone H2A family.
    
 
 0.631
Your Current Organism:
Lachancea thermotolerans
NCBI taxonomy Id: 559295
Other names: Kluyveromyces thermotolerans CBS 6340, L. thermotolerans CBS 6340, Lachancea thermotolerans CBS 6340
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.