STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C5E3J8_LACTCOrotidine 5'-phosphate decarboxylase; Belongs to the OMP decarboxylase family. (265 aa)    
Predicted Functional Partners:
C5DDV7_LACTC
KLTH0C04158p.
   
 0.958
URA6
Uridylate kinase; Catalyzes the phosphorylation of pyrimidine nucleoside monophosphates at the expense of ATP. Plays an important role in de novo pyrimidine nucleotide biosynthesis. Has preference for UMP and dUMP as phosphate acceptors, but can also use CMP, dCMP and AMP. Belongs to the adenylate kinase family. UMP-CMP kinase subfamily.
   
 0.952
C5DCU6_LACTC
KLTH0B05918p.
   
 0.938
C5DBW8_LACTC
Uridine kinase; Belongs to the uridine kinase family.
   
 0.930
C5DD83_LACTC
KLTH0B09108p.
  
 
 0.925
C5DEC1_LACTC
KLTH0C07986p.
   
 0.914
C5DBT0_LACTC
KLTH0A05104p.
  
 0.903
C5DJ36_LACTC
KLTH0F13178p; Belongs to the GDA1/CD39 NTPase family.
     
 0.900
C5DJY4_LACTC
Dihydroorotate dehydrogenase (fumarate); Catalyzes the conversion of dihydroorotate to orotate with fumarate as the electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily.
  
 0.873
C5E2Y7_LACTC
KLTH0H08888p.
  
  
 0.769
Your Current Organism:
Lachancea thermotolerans
NCBI taxonomy Id: 559295
Other names: Kluyveromyces thermotolerans CBS 6340, L. thermotolerans CBS 6340, Lachancea thermotolerans CBS 6340
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.