STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
h16_A0625Outer membrane protein (porin). (363 aa)    
Predicted Functional Partners:
h16_A0621
Outer membrane protein (porin).
 
  
 
0.739
h16_A0390
Uncharacterized protein conserved in bacteria.
  
   
 0.698
h16_A1004
Outer membrane protein (porin).
  
  
 
0.674
h16_A0403
Outer membrane protein (porin).
  
  
 
0.666
arnT
4-Amino-4-deoxy-L-arabinose transferase or related glycosyltransferase of PMT family; 12 TMHs.
  
    0.666
h16_B0121
Outer membrane protein (porin).
  
  
 
0.665
h16_B2451
Outer membrane porin protein precursor.
  
  
 
0.665
nagC
Outer membrane protein (porin).
  
  
 
0.664
h16_A2425
Outer membrane protein (porin).
  
  
 
0.663
h16_B0134
Outer membrane protein (porin).
  
  
 
0.660
Your Current Organism:
Cupriavidus necator
NCBI taxonomy Id: 381666
Other names: Alcaligenes eutropha H16, C. necator H16, Cupriavidus necator ATCC 17699, Cupriavidus necator H16, Ralstonia eutropha ATCC 17699, Ralstonia eutropha H16, Ralstonia eutropha str. H16, Ralstonia eutropha strain H16, Wautersia eutropha H16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.