STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
h16_A0645Uncharacterized protein conserved in bacteria,ImpA-related. (348 aa)    
Predicted Functional Partners:
h16_A0646
Protein of unknown function.
 
  
 0.989
h16_A0654
Hemolysin-coregulated protein.
 
  
 0.977
h16_A0647
Uncharacterized protein conserved in bacteria.
 
  
 0.971
h16_A0648
Uncharacterized protein conserved in bacteria.
 
  
 0.970
impE
ImpE family protein.
 
  
 0.968
vgrG
Two domain protein VgrG.
 
  
 0.967
h16_B2429
Quinoprotein dehydrogenase.
 
  
 0.946
h16_A0652
Conserved hypothetical protein.
 
  
 0.941
h16_B2434
Conserved hypothetical protein.
 
  
 0.935
h16_A0653
Conserved hypothetical protein; Function unknown.
 
  
 0.917
Your Current Organism:
Cupriavidus necator
NCBI taxonomy Id: 381666
Other names: Alcaligenes eutropha H16, C. necator H16, Cupriavidus necator ATCC 17699, Cupriavidus necator H16, Ralstonia eutropha ATCC 17699, Ralstonia eutropha H16, Ralstonia eutropha str. H16, Ralstonia eutropha strain H16, Wautersia eutropha H16
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