STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
h16_A1410Enoyl-CoA hydratase. (567 aa)    
Predicted Functional Partners:
bdxA
Benzoyl-CoA oxygenase component A.
 
 
 0.992
boxA
Benzoyl-CoA dioxygenase A; Unknown EC_number=1.13.14.-.
 
 
 0.982
boxB
Benzoyl-CoA dioxygenase B; Unknown EC_number=1.13.14.-.
 
 
 0.981
bdxB
Benzoyl-CoA oxygenase component B.
 
 
 0.973
h16_B1917
Aldehyde dehydrogenase.
 
 0.966
h16_A1411
Shikimate kinase containing a XRE-type HTH DNA-binding domain; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.
 
   
 0.894
h16_A1412
Benzoate-coenzyme A ligase.
 
 
 0.883
h16_A1413
Predicted hydrolase or acyltransferase.
 
 
 0.842
h16_B1918
Benzoate-coenzyme A ligase.
 
 
 0.839
phaA
Acetyl-CoA acetyltransferase; Catalyzes the condensation of two acetyl-coA units to form acetoacetyl-CoA. Is involved in the biosynthesis of polyhydroxybutyrate (PHB), which is accumulated as an intracellular energy reserve material when cells grow under conditions of nutrient limitation. Also catalyzes the reverse reaction, i.e. the cleavage of acetoacetyl-CoA, and is therefore also involved in the reutilization of PHB.
  
 0.822
Your Current Organism:
Cupriavidus necator
NCBI taxonomy Id: 381666
Other names: Alcaligenes eutropha H16, C. necator H16, Cupriavidus necator ATCC 17699, Cupriavidus necator H16, Ralstonia eutropha ATCC 17699, Ralstonia eutropha H16, Ralstonia eutropha str. H16, Ralstonia eutropha strain H16, Wautersia eutropha H16
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