STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
arp3Ankyrin repeat protein containing three repeats. (255 aa)    
Predicted Functional Partners:
h16_A2910
Putative serine/threonine phosphatase; Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP; Belongs to the Ap4A hydrolase family.
   
 0.897
arp4
Ankyrin repeat protein containing four repeats.
 
    
0.851
h16_A3682
Putative methyltransferase.
  
 0.850
hrpA
ATP-dependent helicase.
    
 0.825
h16_B2100
Two domain protein: Acyl-CoA synthetase (AMP-forming) and acytransferase.
  
 0.823
h16_A3531
Ca2+ sensor (EF-Hand superfamily).
   
 0.809
h16_B1628
Hypothetical protein.
   
 0.809
fdwB
Tungsten-containing formate dehydrogenase beta subunit.
  
 0.793
h16_A1573
Mg-dependent DNase.
       0.786
h16_A1575
Hypothetical membrane spanning protein.
       0.781
Your Current Organism:
Cupriavidus necator
NCBI taxonomy Id: 381666
Other names: Alcaligenes eutropha H16, C. necator H16, Cupriavidus necator ATCC 17699, Cupriavidus necator H16, Ralstonia eutropha ATCC 17699, Ralstonia eutropha H16, Ralstonia eutropha str. H16, Ralstonia eutropha strain H16, Wautersia eutropha H16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.