STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
h16_A2064Conserved hypothetical transmembrane protein; 10 TMHs. (322 aa)    
Predicted Functional Partners:
h16_A2065
Aminotransferase, class I and II.
 
   
 0.663
h16_B0225
Integrase/recombinase protein.
  
   
 0.632
h16_A2559
Conserved hypothetical protein; Thioredoxin-like protein (SSF52833).
  
     0.505
kefB1
Kef-type K+ transport system, membrane component; 11 TMHs.
 
  
 0.493
h16_A3083
Deoxynucleoside kinase.
 
    0.455
h16_A0307
Thioredoxin-related protein, possibly truncated.
 
     0.446
dapD
2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase; Belongs to the transferase hexapeptide repeat family.
  
    0.434
h16_A1184
Predicted hydrolase or acyltransferase (alpha/beta hydrolase superfamily).
 
  
 0.430
addB
Two domain protein: Inactivated superfamily I helicase and RecB family exonuclease.
 
     0.430
rseB
Negative regulator of sigma24 activity.
  
     0.427
Your Current Organism:
Cupriavidus necator
NCBI taxonomy Id: 381666
Other names: Alcaligenes eutropha H16, C. necator H16, Cupriavidus necator ATCC 17699, Cupriavidus necator H16, Ralstonia eutropha ATCC 17699, Ralstonia eutropha H16, Ralstonia eutropha str. H16, Ralstonia eutropha strain H16, Wautersia eutropha H16
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