STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
h16_A2513Hypothetical membrane associated protein. (140 aa)    
Predicted Functional Partners:
h16_A2512
Hypothetical protein.
       0.511
h16_A2514
Hypothetical protein.
       0.508
sunT
ABC-type protein transporter, ATPase, permease and peptidase components: Prot1E family; 7 TMHs.
  
  
 0.508
cyaA
Putative AMP or GMP cyclase containing FHA domain.
  
  
 0.507
fliN
Flagellar motor switch protein/type III secretory pathway protein.
   
 
 0.496
h16_A2511
Hypothetical protein.
       0.495
fimB
Fimbrial assembly chaperone.
  
  
 0.489
fimD
Outer membrane fimbrial usher porin, FUP family.
   
  
 0.480
rtxB2
ABC-type RTX toxin transporter, ATPase and permease components: Prot1E family; 6 TMHs.
  
  
 0.468
h16_B1022
Putative peptidase.
  
  
 0.468
Your Current Organism:
Cupriavidus necator
NCBI taxonomy Id: 381666
Other names: Alcaligenes eutropha H16, C. necator H16, Cupriavidus necator ATCC 17699, Cupriavidus necator H16, Ralstonia eutropha ATCC 17699, Ralstonia eutropha H16, Ralstonia eutropha str. H16, Ralstonia eutropha strain H16, Wautersia eutropha H16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.