Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
cisY | fumA | H16_A2627 | H16_A2528 | Citrate synthase; Belongs to the citrate synthase family. | Fumarate hydratase class I; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | 0.957 |
cisY | fumC | H16_A2627 | H16_B0103 | Citrate synthase; Belongs to the citrate synthase family. | Fumarate hydratase class II; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily. | 0.901 |
cisY | h16_A1229 | H16_A2627 | H16_A1229 | Citrate synthase; Belongs to the citrate synthase family. | Citrate synthase. | 0.661 |
cisY | h16_B0357 | H16_A2627 | H16_B0357 | Citrate synthase; Belongs to the citrate synthase family. | Citrate synthase. | 0.646 |
cisY | h16_B0414 | H16_A2627 | H16_B0414 | Citrate synthase; Belongs to the citrate synthase family. | Citrate synthase. | 0.600 |
cisY | h16_B2211 | H16_A2627 | H16_B2211 | Citrate synthase; Belongs to the citrate synthase family. | Citrate synthase. | 0.675 |
cisY | maeA | H16_A2627 | H16_A3153 | Citrate synthase; Belongs to the citrate synthase family. | Malic enzyme (NAD-binding). | 0.905 |
cisY | maeB | H16_A2627 | H16_A1002 | Citrate synthase; Belongs to the citrate synthase family. | Malic enzyme (NADP). | 0.928 |
cisY | mdh1 | H16_A2627 | H16_A2634 | Citrate synthase; Belongs to the citrate synthase family. | Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family. | 0.979 |
cisY | pyc | H16_A2627 | H16_A1251 | Citrate synthase; Belongs to the citrate synthase family. | Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | 0.934 |
fumA | cisY | H16_A2528 | H16_A2627 | Fumarate hydratase class I; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | Citrate synthase; Belongs to the citrate synthase family. | 0.957 |
fumA | fumC | H16_A2528 | H16_B0103 | Fumarate hydratase class I; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | Fumarate hydratase class II; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily. | 0.985 |
fumA | h16_A1229 | H16_A2528 | H16_A1229 | Fumarate hydratase class I; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | Citrate synthase. | 0.967 |
fumA | h16_B0357 | H16_A2528 | H16_B0357 | Fumarate hydratase class I; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | Citrate synthase. | 0.967 |
fumA | h16_B0414 | H16_A2528 | H16_B0414 | Fumarate hydratase class I; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | Citrate synthase. | 0.967 |
fumA | h16_B2211 | H16_A2528 | H16_B2211 | Fumarate hydratase class I; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | Citrate synthase. | 0.957 |
fumA | maeA | H16_A2528 | H16_A3153 | Fumarate hydratase class I; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | Malic enzyme (NAD-binding). | 0.979 |
fumA | maeB | H16_A2528 | H16_A1002 | Fumarate hydratase class I; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | Malic enzyme (NADP). | 0.966 |
fumA | mdh1 | H16_A2528 | H16_A2634 | Fumarate hydratase class I; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family. | 0.996 |
fumA | pyc | H16_A2528 | H16_A1251 | Fumarate hydratase class I; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | 0.560 |
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